Task History
Every project spreadsheet the tracer team has produced — from the 2011 Omni days to today — the data layer behind the documentation. 315 sheets, grouped by era, each linking to the live Google Sheet. Use it to trace any task back to its raw numbers, and follow the “Related documentation” links to the protocol that governed the work. Some sheets are left out on a discretionary basis, and opening a sheet may require Drive access.
Jump to era: Pinky, Omni & Semantic Ground Truth · CREMI & Fly Ground Truth · Minnie65 / MICrONS & V1DD · FlyWire / FAFB & Optic Lobe · BANC — Brain And Nerve Cord · Hippocampal CA3 · MEC & Hippocampus · Cross-Project
Pinky, Omni & Semantic Ground Truth (2016–2019) (48 sheets)
Where it started: Omni chunk error hunting, semantic segmentation volumes, Pinky10/Pinky100 proofreading, and the first synapse-detection ground truth.
Related documentation: How to Omni (archived doc) · Omni archive · VAST archive
- 2011Omni keyboard and mouse commands (alpha)sorek.m23
- 201610 Piriform trouble spotsben
- 2016Semantic Segmentation Mergfestben
- 2016Segment Time Perben
- 2016VAST by Segmentkylewillie85
- 2016Omni Reviewkylewillie85
- 2016Vol 23 Semantic Segben
- 2016Vol 22 Semantic seg initialben
- 2016pinky10percent_bad_spotsben
- 2016Semantic lableing pink 27 (pretty sure this is vol 26 not 27)ben
- 2016semantic label vol 28ben
- 2016Semantic Vol 202ben
- 201619-34 stitchedben
- 2016pinky10 omnikylewillie85
- 201655 omni chunkben
- 201657 omni chunkben
- 2017omni chunk 66ben
- 2017Omni chunk error 63ben
- 2017semantic_chunk_19585-21632_22657-24704_4003-4258thomas.macrina
- 2017Vol25andsome_synapse_connectionsben
- 2017AC3 Semantic Mapnturner.stanford
- 2017Nick's project Synapse Detection AC3 and AC4ben
- 2017SNEMI3D Synapse Assignmentnturner.stanford
- 2017Vol_502_synapsesben
- 2017Vol_503_synapsesben
- 2017Vast_stack2_timesheetben
- 2018181021_Pinky100_Proofreading_Guidelinesalyssa.m.wilson
- 2018Tracer_Timesheet_Pinky100_Proofreading_Taskalyssa.m.wilson
- 2018Unused Cell Listrynwillie
- 2018Types of Cortex Errorskylewillie85
- 2019vol 019 semantic labelingseldenkoolman
- 2019vol 001 semantic labelingseldenkoolman
- 2019Vol06 Semantic Labelingkylewillie85
- 2019Vol16 Semantic Labelingkylewillie85
- 2019Vol_28_Semantic_Labelingben
- 2019Volume_12_Semantic_Labelingben
- 2019Volume_3_Semantic_Labelingben
- 2019Volume_8_Semantic_labelingben
- 2019Volume_20_Semantic_segmentationben
- 2019Kisuk Editing Taskkylewillie85
- 2019Jay Semantic Label Trainingjay.b.gager
- 20191907 pinky soma subgraph proofreadingthomas.macrina
- 20191909 pinky soma subgraph proofreadingthomas.macrina
- 20191909 pinky orphan segment path checking_E_L23_dual_synapse_review_round1thomas.macrina
- 2019191018 soma branch annotationssven.dorkenwald
- 2019191122 pinky final error estimateben
- 2019E_L23_dual_synapse_review_round2sven.dorkenwald
- 2020Semantic Label_003ben
CREMI & Fly Ground Truth (2019–2020) (15 sheets)
Dense fly ground truth on the CREMI B volume: membrane review, pre/post synapse assignment, twigs and backbones.
Related documentation: How To Fly Synapse (archived doc)
- 2019Review of Cremi B slices 8- to 100 Austin's work reviewed by Benben
- 2019Jay_synapses_Review_Volume001_003_004ben
- 2019Cremi B 1x Coverage Reviewkylewillie85
- 2019CREMIB 3.0 Review (concensus)seldenkoolman
- 2019CREMI_B_Membrane_Review_Benben
- 2019annotations_vol008ben
- 2019backbones_CSV_009ben
- 2019Cremi B synapse mentionskylewillie85
- 2019Cremi B Vol_008_CSVben
- 2019twigs_vol008ben
- 2019vol009_Cremi B_CSVben
- 2019vol009_CSV_twigsben
- 2019Cremi_B_Pre_Post_100ben
- 2019Cremi_B_Pre_Post_Low_Conben
- 2020cell type based synapse evaluationsven.dorkenwald
Minnie65 / MICrONS & V1DD (2019–2024) (17 sheets)
Mouse visual cortex: Minnie65 (MICrONS) proofreading and ground truth, plus the Allen V1DD cutout synapse assignments — and the sheet where the mouse project got its name.
Related documentation: MINNIE dataset dashboard · Proofreading core cells in Minnie (archived doc)
- 2016Cartoon Mice - Project Name Ideaskylewillie85
- 2019minnie ground truththomas.macrina
- 2019basket_proofreadingsven.dorkenwald
- 2019Minnie65 proofreading_04.2019szichieh
- 2019minnie65 L2/3 basket circuitthomas.macrina
- 2020Minnie proofreading as ground truth for alignment quality assessmentszichieh
- 2020Minnie65 core proofreadingsven.dorkenwald
- 2020Minnie65 Auto Seg Failure Mode Collectionszichieh
- 2020Zetta V1DD mouse ground truththomas.macrina
- 2020Targets for Sparse Annotationkisuk.k.lee
- 2020Cutout_002_Synapse_Assignmentben
- 2020Cutout_003_Synapse_Assignmentben
- 2020Cutout_004_Synapse_Assignmentben
- 2020Sparse_Cutout_001_Synapse_Assignmentben
- 2020Cutout_005_Synapse_Assignemntben
- 2021minnie cell type linksforrest.collman
- 2024Minnie65 Production Proofreading_2024szichieh
FlyWire / FAFB & Optic Lobe (2019–2024) (31 sheets)
The full adult fly brain: FlyWire proofreading, synapse ground-truth cutouts, misalignment hunting, optic-lobe cell typing, and the cell-model illustration work (plus a zfish synapse-tagging cameo).
Related documentation: FAFB dataset dashboard · Fly synapse figures
- 2019Folds/Synapsesben
- 2019flyszichieh
- 2019FlyWire_Neuron_Databaseflywire
- 2020FW v.14 Auto Seg Failure Mode Collectionszichieh
- 2021mech_partners_matv15sven.dorkenwald
- 2021Central Brain Connectome Proofreadingsven.dorkenwald
- 2021finding JONschrista.baker
- 2022Synapse-based Central Brain Connectome Proofreadingsven.dorkenwald
- 2022Finding Misalignment Spotsszichieh
- 2022Misalignment Annotationsben
- 2022FW v.15 Auto Seg Failure Mode Collectionszichieh
- 20222022-05-03 zfish synapse taggingszichieh
- 2023U24 FLYWIRE Milestonesmhussein
- 2023SMP_L (v14 to v15)luranmail
- 2023OL_Taggingszichieh
- 2023Optic Lobe Double Check Listjay.b.gager
- 2023template for clusteringszichieh
- 2023Cell model working sheetworkdocspni
- 2023R7-Dm8 pair (yellow and pale columns)jay.b.gager
- 2023FAFB_gt_cutouts_assignmentjabae
- 2023secondary copy of template for clusteringben
- 2023hunting for poor Buhmann syn region for next version of syn detectionszichieh
- 2024Web Knossos Edits for 1/10/24ben
- 2024Buhmann synapse GT reviewseldenkoolman
- 2024Bald Spot Proofreading_Rightszichieh
- 20246526ca09010000ce00dfe7da assignementsszichieh
- 2024Lpi and T5d Synben
- 2024240328_synapse_preliminary_resultsjabae
- 2024Optic Lobe Types (Table S1)am1736
- 2024Infor for Neuronal “parts list” and wiring diagram for a visual systemam1736
- 2024Dm4interfacelinksshortsseung
BANC — Brain And Nerve Cord (2023–2026) (170 sheets)
The Brain And Nerve Cord of the fly: proofreading queues by synapse count, orphan backbones, somas, sexually dimorphic neurons, the optic-lobe pushes, and the can't-fix review rounds.
Related documentation: BANC dataset dashboard · Proofreading SOP · Three-Round Triage protocol
- 2023BANC_proofreading_MasterSheetszichieh
- 2024BANC_proofreading_group1szichieh
- 2024BANC_proofreading_group2szichieh
- 2024AN/DN NBLAST left/right comparison proofreading flagsszichieh
- 2024Collected MANC to BANC Matchesjay.b.gager
- 2024BANC - Nervesyang.helenh
- 2024proofread_tooSmallyang.helenh
- 2024central_brain_nblast_scores_sortedben
- 2024vnc_nblast_scores_sortedben
- 2024interneuron_match_validationjay.b.gager
- 20242024-10-29_banc_tracing_issuesben
- 2024unproofread_segments_with_200+_synapses_in_central_brain_materialization_v365ben
- 2024unproofread_segments_with_200+_synapses_in_vnc_materialization_v365ben
- 2024vnc_low_nblast_root_ID_need_Unsubmit_Reviewben
- 20242024-10-29_banc_tracing_issues_reviewben
- 2024error_collectionjay.b.gager
- 2024brain_and_nerve_cord_nblast_sensory_needs_tracingben
- 2024sensory_needs_tracing_Nov_25ben
- 2024proofread_tooSmall_Reviewben
- 2024banc_neurons_needing_proofreadingjay.b.gager
- 2024sensory_needs_tracing_Nov_25_Reviewben
- 2024outdated_id_coord_matchingjay.b.gager
- 2024remaining_vnc_neuronsjay.b.gager
- 2024central_brain_nblast_scores_sorted_Reviewben
- 2024unproofread_segments_with_200+_synapses_in_vnc_materialization_v365_Reviewben
- 2024v254_unproofread_OL-Right_group2_Reviewben
- 2025unproofread_somas_sorted_by_size_CB_and_VNCben
- 2025central_brain_nblast_scores_sorted_Review_SORTEDben
- 2025Copy of proofread_tooSmall_clean_upben
- 2025Copy of v274_unproofread_OL-RightBox10_group2 Because_can't Editben
- 2025unproofread_200+_central_raw_databen
- 2025unproofread_segments_with_200+_synapses_in_central_brain_materialization_v365_Reviewben
- 2025v274_unproofread_OL-RightBox10_group2_review_1_1ben
- 202554k Cells Mega Listben
- 202554K_200+_Syn_Obj_1ben
- 2025unchecked_vpn_top_3_with_linksjay.b.gager
- 2025unproofread_somas_sorted_by_size_CB_and_VNC_reviewben
- 2025Merge_Monstersben
- 2025sexually_dimorphic_neurons_VNCcksalmo
- 2025Sheet_2_v274_unproofread_OL-RightBox10_group2_review_1_2ben
- 202554K_238+_Syn_Obj_2ben
- 2025unchecked_vpn_matchesjay.b.gager
- 202554K_200+_Syn_Obj_1_Reviewben
- 202554K_238+_Syn_Obj_3ben
- 2025potentially_dimorphic_neuronsjay.b.gager
- 202554K_200+_Syn_Obj_4ben
- 202554K_238+_Syn_Obj_2_reviewben
- 2025100-200_synapses_CB-VNCben
- 2025BANCv470_unproofread_post_root_ids_with_100-200_synapses_CB-VNC_updated-backbone_again_Real_Mega_Listben
- 2025bancv470_unproofread_post_root_ids_with_100__synapses_cb-vncben
- 2025bancv470_unproofread_post_root_ids_with_100__synapses_cb-vncben
- 2025BANCv470_unproofread_pre_root_ids_with_100+_synapses_CB-VNC_updated-backbone_Mega_sheet_defunctben
- 202554K_238+_Syn_Obj_3_reviewben
- 2025100-200_synapses_CB-VNC_reviewben
- 2025BANCv484_unproofread_pre_root_ids_with_100-200_PREsynapses_VNCben
- 2025BANCv484_unproofread_pre_root_ids_with_100-200_PREsynapses_VNCben
- 2025BANCv484_unproofread_pre_root_ids_with_100-200_PREsynapses_VNC_rawben
- 2025BANCv495_1-5000_unproofread_pre_root_ids_with_100-200_PREsynapses_CentralBrainbenjamindsilverman
- 2025BANCv484_unproofread_pre_root_ids_with_100-200_PREsynapses_VNC_reviewben
- 2025BANCv495_10001-15000_unproofread_pre_root_ids_with_100-200_PREsynapses_CentralBrainbenjamindsilverman
- 2025BANCv495_15001-20000_unproofread_pre_root_ids_with_100-200_PREsynapses_CentralBrainbenjamindsilverman
- 2025BANCv495_20001-25000_unproofread_pre_root_ids_with_100-200_PREsynapses_CentralBrainbenjamindsilverman
- 2025BANCv495_25001-30000_unproofread_pre_root_ids_with_100-200_PREsynapses_CentralBrainbenjamindsilverman
- 2025BANCv495_30001-34523_unproofread_pre_root_ids_with_100-200_PREsynapses_CentralBrainbenjamindsilverman
- 2025BANCv495_5001-10000_unproofread_pre_root_ids_with_100-200_PREsynapses_CentralBrainbenjamindsilverman
- 2025BANCv495_ALL_unproofread_pre_root_ids_with_100-200_PREsynapses_CBcksalmo
- 2025Can't_Fix_Mega_Sheetben
- 2025BANCv495_1-5000_unproofread_pre_root_ids_with_100-200_PREsynapses_CentralBrain_reviewben
- 2025Optic_Lobe_Left_1001-2000-presynapse_fragmentsbenjamindsilverman
- 2025Optic_Lobe_Left_2001-3311_Presynapsesbenjamindsilverman
- 2025Optic_Lobe_Left_3340-50007_synapsescksalmo
- 2025Optic_Lobe_Left_501-1000_presynapse-fragmentsbenjamindsilverman
- 2025BANCv457_unproofread_somas_sorted_by_sizeben
- 2025BANCv457_unproofread_somas_sorted_by_sizeben
- 2025QC for CAVE updatesam1736
- 2025Somas_Left_Optic_Lobe_Insidebenjamindsilverman
- 2025proofreading_Princeton_250505yang.helenh
- 2025Somas_OL_L_Master_from_ASBatescksalmo
- 2025Somas_OL_L_Edge_1-5000benjamindsilverman
- 2025Somas_OL_L_Edge_10001-15000benjamindsilverman
- 2025Somas_OL_L_Edge_15001-20000benjamindsilverman
- 2025Somas_OL_L_Edge_20001-25000benjamindsilverman
- 2025Somas_OL_L_Edge_25001-30000benjamindsilverman
- 2025Somas_OL_L_Edge_30001-34583benjamindsilverman
- 2025Somas_OL_L_Edge_5001-10000benjamindsilverman
- 2025proofread_Princeton_250509yang.helenh
- 20251. AN/DN and random cell in NCben
- 202510. v282_OrphanBB_conn15ben
- 202512.v305_OrphanBB_VNC500+synben
- 202513.v305_OrphanBB_CB500+synben
- 20252. unproofread_NC_v151, v157, v159ben
- 20253. unproofread_CBben
- 20253a. neck connective unmarked completeben
- 20253b.Nerve Endingben
- 20254. remained unproofread_NC_v229ben
- 20255. v236_remained unproofread_CB_combinedben
- 20256. v254_unproofread_OL-Right_combinedben
- 20257. v258_remained_unproofread_CB+VNCben
- 20258. v274_unproofread_OL-RightBox10_combinedben
- 20259. v282_OrphanBB100ben
- 2025BENS_Copy_of_BANC_proofreading_group1_FOR_STATS_CONTAINS_COMBINED_WOORKSHEETSben
- 2025BENS_Copy_OF_BANC_proofreading_group2_FOR_STATS_CONTAINS_COMBINED_WOORKSHEETSben
- 2025BENS_COPY_OF_BANC_proofreading_MasterSheet_FOR_STATSben
- 2025UPDATED_Can't_Fix_Mega_Sheet_May_2025ben
- 2025v236_remained unproofread_CB_group1ben
- 2025v236_remained unproofread_CB_group2ben
- 2025v254_unproofread_OL-Right_group1ben
- 2025v254_unproofread_OL-Right_group2ben
- 2025v274_unproofread_OL-RightBox10_group1ben
- 2025v274_unproofread_OL-RightBox10_group2ben
- 2025proofread_Princeton_250527yang.helenh
- 2025All_Optic_Putative_Tadpole_1ben
- 2025Asymmetric_Input-Output_1ben
- 2025Manual_Missing_In-Out_1ben
- 2025Manual_Tadpole_1ben
- 2025Manual_Tadpole_2ben
- 2025Manual_Tadpole_3ben
- 2025Manual_Tadpole_4ben
- 2025Missing_Axon_1ben
- 2025Other_Manual_1ben
- 2025Probably_Incomplete_Kenyon_Cell_1ben
- 2025Putative_Tadpole_1ben
- 2025With_Nucleus_notProofread_1ben
- 2025Path-Swaps-For-Ranben
- 2025New_UPDATED_Can't_Fix_Mega_Sheet_For_Cave_Aug_27ben
- 2025BANC_Ripped_Area_Mega_Sheet_For_Chrisben
- 2025Total Stats OL_Left_For_Chris_2:30_Meetingben
- 2025stubborn_dimorph_huntjay.b.gager
- 2025501-1000_Synapse_Fragments_L_OLcksalmo
- 20251001+_PREsynapse_fragments_OL_Lcksalmo
- 2025201-500_POSTsynapse_fragments_L_OLcksalmo
- 2025201-500_PREsynapse_fragments_L_OLcksalmo
- 2025Curated Merger Split Starter Segments 2025 Oct 13thben
- 2025Type match verification BANC <> MANCam1736
- 2025unproofed_with_proofed_targetsjay.b.gager
- 20251001+_PRE_synapses_OL_Rcksalmo
- 20251001_POSTsynapses_OL_Rcksalmo
- 2025501-1000_POSTsynapses_OL_Rcksalmo
- 2025501-1000_PREsynapses_OL_Rcksalmo
- 2025unfproofread_with_soma_L_OLcksalmo
- 2025Coords_BANCv495_10001-15000_unproofread_pre_root_ids_with_100-200_PREsynapses_CentralBrain_20251121_2257ben
- 2025Unproofread_w_soma_20+_PREsynapses_R_OLcksalmo
- 2025Unproofread_w_soma_20-49_PREsynapses_L_OLcksalmo
- 2025tags-missingben
- 2025postsynapse_proofread_presynapse_not_0-60_synapsescksalmo
- 2025postsynapse_proofread_presynapse_not_50-60_synapsescksalmo
- 2025Unproofread_w_soma_20-39_PREsynapses_R_OLcksalmo
- 2025100-200_POSTsynapse_fragments_OL_Lcksalmo
- 2025100-200_POSTsynapse_fragments_OL_Rcksalmo
- 2025100-200_PREsynapse_fragments_OL_L_Sheet#1cksalmo
- 2025100-200_PREsynapse_fragments_OL_L_Sheet#2cksalmo
- 2025201-500_POSTsynapse_fragments_OL_Rcksalmo
- 2025201-500_PREsynapse_fragments_OL_Rcksalmo
- 2026Round-2-Pushben
- 2026Round-2-Push-Evaluationben
- 2026roughly_proofread_jasper_submissionjay.b.gager
- 2026banc_point_of_interestjay.b.gager
- 2026banc_meta_bigdata_view_intersects_rough_PU_tracers_20260210cksalmo
- 2026BANC One-Off Tracing Issuesyang.helenh
- 2026unproofread_cant_fixjay.b.gager
- 2026CT1-APLben
- 2026single_pass_cant_fix_reviewben
- 2026second_pass_cant_fix_review_1-664ben
- 2026single_pass_cant_fix_review_1-5000cksalmo
- 2026single_pass_cant_fix_review_10001-14582ben
- 2026single_pass_cant_fix_review_5001-10000ben
- 2026banc_rough_spot_meshingjay.b.gager
- 2026sex_specific_nblast_cross-sex_matchescksalmo
- 2026first_10k_truncated_tod_2026_07_15jay.b.gager
- 20262026-06-29_banc_missing_nucleijay.b.gager
Hippocampal CA3 (2024–2026) (2 sheets)
CA3 proofreading: pyramidal, mossy fiber, and inhibitory cell work.
Related documentation: CA3 dataset dashboard
- 2024all_pyramidal_cellszhihaoz
- 2024CA3 proofreadingzhihaoz
MEC & Hippocampus (2024–2026) (9 sheets)
Medial entorhinal cortex / hippocampus work with Zetta: semantic labeling, synapse annotation, and segmentation logs for the Zheng volumes.
Related documentation: MEC synapse annotation 2026-08 (doc) · Voxel Painting SOP
- 2024zheng-hippocampus-semantic-labelstmacrina
- 2024zheng-hippocampus-synapse-logtmacrina
- 2024zheng-hippocampus-segmentation-logtmacrina
- 2024zheng-hippocampus-bridging-the-gaptmacrina
- 2025MEC Segmentation Label Revisiontmacrina
- 2026MEC_5Cutout_Semantic_Labelererichammer2017
- 2026mec_ground_truth_jan_2026_organizational_sheetjay.b.gager
- 2026MEC_semantic_labeling_rederichammer2017
- 2026MEC_4BBox_Syn_Annerichammer2017
Cross-Project Logs, Templates & Tooling (23 sheets)
The connective tissue: task logs spanning every project since 2016 (start with “Every Task Done At Work Since March 12, 2019”), reusable sheet templates, and infrastructure registries.
Related documentation: tracertools Catalog
- 2016Tracer Projectskylewillie85
- 2016Task Time =Dkylewillie85
- 2016Ground truth logthomas.macrina
- 2017Copy of Tracer Projects1ben
- 2019Tracer Trainingrynwillie
- 2019Every Task Done At Work Since March 12, 2019ben
- 2019projects - time spent logszichieh
- 2019Workstation & Server Backupsdbarlieb.pni
- 2023Seung Computation_workstation_Server Backups_Clustermhussein
- 2024ben's testben
- 2024How Ben Proofreads - Line chart 1ben
- 2024Template for Nerve Taskben
- 2024Template_Of_Regular_Sheetben
- 2024Ben's Master Status Sheetben
- 2024Template_Review_Sheetben
- 2024Sheet Filter and Ranges A:1ben
- 2024tracer_tasksjay.b.gager
- 2025Copy of Template_Clean_Up_Need_2ndben
- 2025BENS COPY OF Tracer Projects 2016-17ben
- 2025New Sheet Filter and Ranges A:1ben
- 2025Template Of Advanced Work Sheet - Extra Columns & Filtersben
- 2025Every Task Part 2ben
- 2025useful_ng_layersjay.b.gager